jgi.p|Nanoce1779_2|597211, gene_6511 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|597211
Unique Namegene_6511
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:59953..61299 +

Link to JBrowse

Properties
Property NameValue
TranscriptId597297
ProteinId597211
Product nameProtein phosphatase 2C (PP2C)-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:59953..61299 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004721phosphoprotein phosphatase activity
GO:0004723calcium-dependent protein serine/threonine phosphatase activity
GO:0004724magnesium-dependent protein serine/threonine phosphatase activity
GO:0008420RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0008597calcium-dependent protein serine/threonine phosphatase regulator activity
GO:0017018myosin phosphatase activity
GO:0017020myosin phosphatase regulator activity
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005963magnesium-dependent protein serine/threonine phosphatase complex
GO:0017023myosin phosphatase complex
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597211mRNA_6511-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597211mRNA_6511Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|597211

>mRNA_6511-protein ID=mRNA_6511-protein|Name=jgi.p|Nanoce1779_2|597211|organism=Nannochloropsis oceanica|type=polypeptide|length=241bp
MEALILKALMEEGRRQDGSTAIAAVVAGERLFVANLGDCRAVLATQTPEG
RVEATRLSVDHKPDVEEEKKRVGKAGGRVEFSGCWRVAHSSIPMRLAVSR
SFGDPTFKRYYSADAPSLMLRRHVSGTGMQEEVNAGPPLPLPPEGFEPLV
SPVPEVTYHRLTRDDLFLVLASDGVWDMMSDSEAILVVAEVFEQHNTLGN
AEAPFTEFAVKKAAERVIGLALSKGAYDNCTVLVVGFQVQ*
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Synonyms
Publications