jgi.p|Nanoce1779_2|594961, gene_6423 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|594961
Unique Namegene_6423
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:593575..594939 +

Link to JBrowse

Properties
Property NameValue
TranscriptId595047
ProteinId594961
Product namemethyltransferase-like protein 5-like
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:593575..594939 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G02010NO20G02010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594961mRNA_6423-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594961mRNA_6423Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|594961

>mRNA_6423-protein ID=mRNA_6423-protein|Name=jgi.p|Nanoce1779_2|594961|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MKLRHLESALSQVNGFGEPKWGLEQYLTPPHLAARALQCAASFDDLEGRV
VADFGCGTGMLLVGAALMGSDEALSVGVDADPDALAIAQTNLHGMNVECA
LLRADVVAEAGVPFRSRSSDGSSMFDTVLMNPPFGTKNQGVDLLFVKRGL
AVAPVVYSLHKTSTREFLIGRGAAACGSDVGAEVIATMHFDLPATYKFHK
QKSVDIEVDLLRFSRGDEPR*
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Synonyms
Publications