jgi.p|Nanoce1779_2|88205, gene_6268 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|88205
Unique Namegene_6268
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:180354..183843 +

Link to JBrowse

Properties
Property NameValue
TranscriptId88291
ProteinId88205
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:180354..183843 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G00530NO20G00530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|88205mRNA_6268-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|88205mRNA_6268Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|88205

>mRNA_6268-protein ID=mRNA_6268-protein|Name=jgi.p|Nanoce1779_2|88205|organism=Nannochloropsis oceanica|type=polypeptide|length=1016bp
MVAPARTGSSCLHFFRLLLLLLFLQSPQAFGPPSFTITVTCMRSSSSNSG
KSSSSSRRRRRSKTMLSISSAGAIPSSSFSSPSSSSTGNSNNPHEGNSLS
SSPSYTIQASATAAAVPGGGGGSIHMPRIRSSSSCSGQYQSGSLPSPSNP
PSVLADCASMTPLQRQLVWGEEELRSRIREVEEDVDTLKATARALCLKGK
WEEAEVVVKKLYLDRSVEEEEEGGLKRTWRRSMGTGQRMEYSERRRVAAR
KRKEMRRVERVGVPLSLAFLHVCRAEEAWPSALSFVDEVLLEKETEKGAG
EEGKEEGLLMPSTILPLKKELAQEALHICVGAGDIRRALEITRRAEAGES
ALLLDLALQACAMHKKRPQSSPSSAPPSAPFSSSSFLQPPLPPPAATTEE
TTLGVTVLTLIREARCRTPRTPAAPAARAISPSQRGWEAASSALTAAGPL
RLLLSEAKRVAAVAAAVGSSPSSSSPSSSSSPPMWLLYEKAIRASVDEGQ
EAEALLLYREGVRWATVEGEGGKERTVSSTTSPTTSSSSSSSYGAIPVAI
HEAALEAYARRGLWRPALEVLDGLRKEEMDGRREGGPSVACFNAAIRACC
VGNEWERGVGLLRRMEAAGQEADEETYGVIMQAFARAGEWKGSLKLLEYI
EKKTEGGREGGREGGVTPALARAAANICVRAQRYEEARALVASVLHRGKE
TSSSFTSSSSSSSSSSSSSPSSVALPAIQPAFLALGLWSLACATPSSWAG
PSRQEEAFQLVTALMDSQTPIALETYEHACQALLSLGGGSSTSTSTSTST
STSSQKYETALRDVYRHGVAAGVLPSSPPSLTSSSSSPPSVDLRGLRPTL
AKVAMVSALESLLHLHPLQNKKEEGREERCVMTASSSSFSSFSSSSSSSS
SFSSFFFPYSSSSSHAPSPLIIITGTGRVKGAVQRFLRTACFPPLLPQPV
PYNAGRLLLPWSQIQCWKEGGGMVALSTSVGVEKGKVGGGNGKGGGDGGG
EGGGGGGRGRRGGGG*
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Synonyms
Publications