jgi.p|Nanoce1779_2|671851, gene_6234 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|671851
Unique Namegene_6234
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:80208..82679 +

Link to JBrowse

Properties
Property NameValue
TranscriptId671937
ProteinId671851
Product nameDegT/DnrJ/EryC1/StrS aminotransferase family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:80208..82679 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G00240NO20G00240Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671851mRNA_6234-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671851mRNA_6234Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|671851

>mRNA_6234-protein ID=mRNA_6234-protein|Name=jgi.p|Nanoce1779_2|671851|organism=Nannochloropsis oceanica|type=polypeptide|length=669bp
MLKSSLPDDWVHLPFDTSALGVRTALLKSTIEFSQLRKVINTCAKQGLEL
LYWTPDSDVGTVIHNQEWFTGYGVAKGVEFKLPLANRHSGSTSQIPLEMS
PDFFVEPLASIEEEDFYDLVDLALIAGHHSRFRLDPALTHAQFKSLYKAW
LQNSVTRQVADQIFVARRKEDGKATGFITVKLAVDRNSASIGLLGVSPSC
QRQGLGAALISAACEFTQSADIPQITVRTQEDNHMAINFYGAQGFMPHDN
GPKTTYHIWLTHRVIDRVQYNVPNLTGDEGKEVSRLINSQRLDSLGRYTV
ACEHWLETNLGCSKALLTLSATAALEQAILLCKIGPGDEVIMPSFTFVST
ANAVALRMATPVFIDVGDDLNMDIAAVSEAVTSKTKAIMVVHYGGNACDM
DNIMHLAKEKELYVIEDAAQAFLSKYKGRCLGTIGHLGCLSFHYTKNTVC
GEGGALLVNDPRFHSPAAIIREKGTNRADFMLGSVSKYEWMSLGSSYVPS
ELCSAFLLPQLLDANESAYRRKRVCDAYRVLLAPLAARGCFRFLKVLSDR
NGAAMLADTCGNGHLFPIIFPSTDSRKMAQTAMTTKNVQCLTHFVPLHLS
QGGMKYGKVWPHASLESTITASACLLRLPVWPGMRFGHIQYVVQVLYEHF
GEDCPSVTTAMHLFMPTT*
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Synonyms
Publications