jgi.p|Nanoce1779_2|668580, gene_596 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668580
Unique Namegene_596
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1478493..1485543 +

Link to JBrowse

Properties
Property NameValue
TranscriptId668666
ProteinId668580
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1478493..1485543 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05640NO01G05640Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668580mRNA_596-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668580mRNA_596Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668580

>mRNA_596-protein ID=mRNA_596-protein|Name=jgi.p|Nanoce1779_2|668580|organism=Nannochloropsis oceanica|type=polypeptide|length=1217bp
MHAVRAWPKALTFELWARLRATQLIPETTSQYDYFDVAFSGAVTVLLLLT
EEEAERSSDLLAELDELAGRGRYQEALALLKSGGSTVGAVHYHKAIVACK
MSRQWALALRLLEEMRAIPGIQVMLHTYGTVMDICASAGQLDQALQVASW
MESAGLPLNKVAFTTLLKACAQAKQGFRALEVLQRLHASDIYFDYLGYLK
AVEILGASGLVHEALSELEGMLEEEVAADHRIFFSLIRNALLHNHLPVAA
RTAVLMDTEGYTPPASSLKLLMESLIKAGLAARGLELLDTVGPASFSGMS
IKVWFNLRLRLCLSCRDKEGAFKELEQMQNQGIELNDSRTVSLALRLFTP
SRPPSLPPSRPSSCSLLRLFLLLRAVSAPLDTVAYTTAIAHATDSTEAYA
LLALMDQPPPSPPPSPNDVTYTALIHHLVREGDFQAGKDILFSMKAKGIP
PSSVTICAILNAYLKQNRAQEALTFFHTVFPSFPPSSPPSSPPPSPPVHD
LGVELDLKLQTTYLSLLLALRRPLSEIQAYVQAVESREGGREGWREGGGK
IYALWAKACMAAREWKAAVRLIKRGHTQGVDLDNRFYTVLLDGLAQAGQS
SQAMHVFKEMQSKGITPNAYAYAALLKAFTSSSFSSSSSSAARAARRRGK
EVEEGEGEEGEEGGRGGGGAGRRLREYIELFDAAEAEGRLTPSVINYNAL
IDACGKIQDPAGAASFFQRLQASPSLRPDVVSWSVLIKALAHSGDFDGAF
AALKDMIAAAEGGGGGGGGGGREGGGGAGGVWPTDRTFNPLIDRCARAGR
DELVEEALALMRQYSTRPPDVITYNSLLTAELLRGGGPQGVLARMKEGRV
KPNTITYNILLDHYSRAGDWSKAFAALEEMKQASLAPDVQTYNHLLDGLS
RAGKFIEAESLFKRMMGEDEGEGGKEGGVGMDSFTALVMLTMYGKQGDLH
KVDALATRLFPSMPSAEEEEEREGEGSPKSKTPPGGGKDARRRGRGRGGG
GGRGGEGGGEGGGGGRSRAASPAVAAKLVGIYLQHQQAGQVVSLLSSVHS
SRLFPIQPSWISSLVLHSLLRSRPQEAFRVLELARFSWGVRLSGKTYAAL
ARAVLEGGEGREGGREAVQAVELLLLEGRRKREVALCKDLGLVLVQMVKA
GRRVRRREEGGREGEVKEVIEEMVVKRVVGREEADEWLREMEEEEEEEEE
GRGREERGEREENRIA*
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Synonyms
Publications