jgi.p|Nanoce1779_2|593213, gene_5944 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593213
Unique Namegene_5944
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:133774..135882 -

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Properties
Property NameValue
TranscriptId593299
ProteinId593213
Product namenad-dependent epimerase/dehydratase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:133774..135882 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593213mRNA_5944-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593213mRNA_5944Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593213

>mRNA_5944-protein ID=mRNA_5944-protein|Name=jgi.p|Nanoce1779_2|593213|organism=Nannochloropsis oceanica|type=polypeptide|length=446bp
MTRKSISSGYKLHPLSRSCLAAHGAPLRKPCGPPSNSKTHHPPFPLFTLC
QPNQPPNSLYSKATMSNSSTPLVTGKKVLVAGGGGFIGSHLARRLKKDGN
YVVVADWKRNEFMTEPEFCDEFLQVDLRELDNCIKASKGCHHVYNLAAEM
GGMGFIESNQSVLMWNNTMVSSNVLEAARRNGAERYFYSSTACVYNEDLQ
LDPSNPGLKEADAWPAKPQEMYGLEKLYHEEMALAYSRDFPMVSRIARFH
NVYGPFGTWKGGREKAPAAFCRKAVGSTEHFEVWGDGEQTRSFMYVDDCV
EGVLRIMMSETAVKPLNLGTEEMVSMNKFAEIAMSFENKYLPIKHIPGPQ
GVRGRNSDNTLIREELGWEPLISIQEGLRETYFWIKGQIEKERAAGIVFD
YSSSKVVVQTTDSLDALGGKEKGLVSSIPESDLASNSNAGIQVIA*
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Synonyms
Publications