jgi.p|Nanoce1779_2|590587, gene_5864 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|590587
Unique Namegene_5864
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:768770..770457 -

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Properties
Property NameValue
TranscriptId590673
ProteinId590587
Product nameRegulatory factor, effector binding domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:768770..770457 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02810NO14G02810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590587mRNA_5864-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590587mRNA_5864Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|590587

>mRNA_5864-protein ID=mRNA_5864-protein|Name=jgi.p|Nanoce1779_2|590587|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MQRLSTTLLSLAALLILGTAAAAGDVCHLYSTTIESPCFTTVKNTSAYEV
RKYGGDEMWTSAHIKARSFAVAQNKGFMTNFEYISGENSKEEKIPMTAPV
IFRRSPDGDAGWLVSFFVPSKFATKDDVPLPNNEDMSIMSLEGATYAVRV
FDGFATIWDFEKNEYELKKALLADGVAPMEDKNNGVIYAGYDSPFVYVNR
HNEVWVRVA*
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Synonyms
Publications