jgi.p|Nanoce1779_2|577800, gene_574 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|577800
Unique Namegene_574
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1408811..1412291 +

Link to JBrowse

Properties
Property NameValue
TranscriptId577886
ProteinId577800
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1408811..1412291 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05450NO01G05450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577800mRNA_574-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577800mRNA_574Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|577800

>mRNA_574-protein ID=mRNA_574-protein|Name=jgi.p|Nanoce1779_2|577800|organism=Nannochloropsis oceanica|type=polypeptide|length=737bp
MKPFTKDKTTTSIKRESDGVVFEVDQRVSFIDPQSGIYTDGIVIGIHGPE
EIEVGYWRSSWSDTKYNRLVSVDTLLRCGKVSGSMKRKSTAAAAAPSPTP
ADTAKSANSTTSVNRASASAEIASGSTTGTVSFTSTSTNSKASTAEVTSP
KRDIENNVTAFSVKKDANTPTPADEADSTTPGADAAPSSAQVTSVKGLSS
FGAPNEESLAPTKECSSVPDSVPECRSTTAISPAFASLPQKGGTDPTTVT
SSKAIAASVPIIKDFHVRTSARVSACPLCIGCGTRGPPLTARSTISKEWT
CQACLEHVNSCSPNSSLAPVSMKDPLAPAGPGKVKKRDRETESGRSKQRG
EKKQGKAFPDTNSVYTRDMGKNDGERETKSAEEDHFEAEGLAPSIQAALG
ISRSFPPLQAPATSADASGSSTSGPGITQECTSSLFPLASKAPTPTSELA
AGAEVANYSASVRPHTVPLQQQQQSLDPSSLEANFLLNPLEGGESHPLYA
WMPSGLSAEERNLQIQKGKKDMWGTAVALVRLREEVERCFQTMDGEEGLH
LAVARHKQQQHHLAQPLPLQSVTSQSSFMPHGSMHGSYLHRHPQQQQQQQ
QQLQQRLLNGRVPISHHLACQSTSSPIAGLHFPNSHLTSPDPAPSITEPR
HHFGQGLPYQPPPLSLSSLCAPPQSYVQGHDSFCHQQGQQPLHVNHQQHP
PQTRHMYAYPRYQEKQQQQKQQQQQQQQQQMMYQYR*
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Synonyms
Publications