jgi.p|Nanoce1779_2|577792, gene_573 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|577792
Unique Namegene_573
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1404587..1407731 -

Link to JBrowse

Properties
Property NameValue
TranscriptId577878
ProteinId577792
Product nameRNA methyltransferase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1404587..1407731 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05440NO01G05440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577792mRNA_573-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577792mRNA_573Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|577792

>mRNA_573-protein ID=mRNA_573-protein|Name=jgi.p|Nanoce1779_2|577792|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MGQEHRTLRSSGAGREGYSKTFRPLSGRNFCLLLHCATFVMIAAAAAGGR
RTPGLQMLSTLRTRGWDVLSGMVSSTSTNNCRRRGLSSSSLGFVLPSATP
SQTAGAAIRRQWAAPIKTTTTTTTRRTISSSPPLLLNRLLFEPEEVIAMP
QQQQQQQQKKKKALEDAMAVVRIAKDDARSRHVRKILRAQSGDCVRVGVL
NGGRNNEAPVEWEADGSLHIALGPASSLLRPPPEDERPRVDVLLAMQAPL
RMERIIPHIVALGVGRLLITSAKKVEKSYWGSHLLREPDALRDLVIEGLS
QAGDTFVPDIIINRRVKRFLEDDLEALYPSSPASTHTSLFHPTLRVLSHP
FRVLHDSPGVDTRFRHLTPPPITGGRDGRKEGGRQRPRLLLAIGPESGWD
EPYELDLFQQHGFQQVTLGPRVLRTEAAVPALVALAHDCLHALDEQWELE
VAQAETRILASRNGSTAVIDDCASVTKEP*
back to top
Synonyms
Publications