jgi.p|Nanoce1779_2|590042, gene_5701 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|590042
Unique Namegene_5701
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:355047..360506 +

Link to JBrowse

Properties
Property NameValue
TranscriptId590128
ProteinId590042
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:355047..360506 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590042mRNA_5701-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590042mRNA_5701Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|590042

>mRNA_5701-protein ID=mRNA_5701-protein|Name=jgi.p|Nanoce1779_2|590042|organism=Nannochloropsis oceanica|type=polypeptide|length=1620bp
MGGEVGGTAVPLKEFVVRISHFEVDEGDDLNMATSARVYYTRLPEDVFGR
ENMGWEDLSSLDPVKCKLKPEQAAGIEKEVRDRLARKSEVFYWDGVDKGS
KEKMPKSVDWIAGAVDQRARKYENMLVMVKDGRGQALSELTSVIKGMYSV
QLEVKRRGEGEAVVVEGASCSEMKTVDVDGPCYSFRLPPSLVAGRYLLAF
SIVGPAPGCEKIGGTNNFNVTVNEEPAGEPTEAELDGLRSGSRGATLVFS
EEMPLPAFSLLLKDHRNRSTTTESVTLCLELEKDNFSIEYRGKKGKRVQG
DGAIEQASTGRSIKKRGQGAAAVAAAVSTVALSSFSSNICFKMNAEAAEE
GIIFETGDWVLLPNLSKGPILGGETPETLKKAITIIVISAGEKLQNQRLK
RELVIEPGLPVSLELVEPELKGRAGSTTPETALKISSETQVLPTLRFKAL
DVGGNVTAPGRTQRWGVELAMDEKGVRLVEPATRRNDPGWKVSPLGEVLL
DGLSLNVTFKKEDKGRKMVTLEVTGTAGEESFSASPVHLAVEAQKGVPKR
AWLEMKGEGILNDGMIASTAEEADDEEVEEEGEGEEVGMVRVKAGRKMKV
LLPAGSTVLKPTVVVVDETGMHLDPAKVGMKVKATATSWSHTKELSDAAE
LPTLPGPTDKVIKIQVQVFHAKQTASSMGRSVAPAFLLEADIHPIPGEPD
HISFTRDLAGPVRCGVSFNKQKSLIHYRDKFKNFLVVDPAHALPCPELQW
TSSDKNIPMKQEPEGPLKTVLGEDGAYHLPTDVTLWGKAREIKLRVTAPK
FTPMKSMVKLLPGPAHALKLVAPKHGVEVLSDKPAINLCRGEKLESLSIA
FLDECGNRVNPPTDGVLSLFWNDRVSSRTSTAASRPSLTNPSPSELISKV
VIGKEHQTGDPDNFIPPDLLALPTFVFNERRERVLRVELKAPGRGQEGGE
VLCTGEMVVKTYLVNRVVGMRVVVGEATRISYPEERGVNDQRALTSPMLE
KGLLQFKPQDRWDVDTGPPALGIVLETEDKEDPTNLNLALNAGVFRVRVE
REGTTRVHNEDWYKGVEVEEGVLTEDGKRVFVLAPSTDCTMGDPGNFQIR
LSYLEQREHIKRVTPNKKDWQLDKPAIVYIQHGRAVGLRSEDSTLEAIAL
SASNNRDDPSARQILREARFYPIDQQGKRTRHESNLIVTVVTGPPGPPEV
PPAGQGPCIVRGRVTAEPRQDIKTGLTTYLIPEISLEKDVGTESGSYRLK
FDSPGLEPYFKTFDFTTDLERQLKIRRLNQELNPLRQEVMAWKHEVQGME
GQAHELTGRLHGELRYLHAQAGLFPRTPQGELPTSQELREAKAHLENGIR
ALRSQEVAVLRKRPGYLVPAVLSQGFKEVVTVGMVPDRRLAELLSWYATT
RNMKAVICQTNADYKRVKLLQRDVTVYSLQDTEEFRSRDKTREQILKDKR
LPLPPIDAKFNYRGHAVNMIVLREEDEHLRQSVFWSMFSNTVILGTEDDA
LAYREYCKHRGIRRPTILCYQDGRRLRASGPLDGEDKFGSSEARRLEFVF
GGQDPQETEAFKAQLMAKDKVDELFVVYQELDVIRGQMQAKKQDVRMLEL
QKRVSAMELELKNILGNRV*
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Synonyms
Publications