jgi.p|Nanoce1779_2|577759, gene_570 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|577759
Unique Namegene_570
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1383434..1386044 -

Link to JBrowse

Properties
Property NameValue
TranscriptId577845
ProteinId577759
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1383434..1386044 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577759mRNA_570-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577759mRNA_570Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|577759

>mRNA_570-protein ID=mRNA_570-protein|Name=jgi.p|Nanoce1779_2|577759|organism=Nannochloropsis oceanica|type=polypeptide|length=337bp
MYVAIYRGRVVVAISHRQRWGPHSSTSASSCNSSGSNHAVTPAFASTWST
EIDGLLYAPTTTTQAGLGSCMGVQTHRGRYAAFTCLQPDENSQNADAEAL
GMLVAAYLSGCSTTPHSANDENSTDPPRQFLSAGAGLEALLRVRDGDLLL
GSSDTDEHVLIVAHLRQGRVVGVQDLNLQFGGSRADGGSVLLRAPSTLKS
DLDRAVLSWPEEVNGTKNFCSRVLSSLAMWHCKCYGRRLWYFATTVIEQS
LNKVNIFYLHFYLTRPRAYAGQHNYPVDFFCREVLGQQNVRVSTSVPVSI
PHEIIRLARRQHAQYHTKHLYAHSCARFFTNDKRVL*
back to top
Synonyms
Publications