jgi.p|Nanoce1779_2|245585, gene_569 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|245585
Unique Namegene_569
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1381497..1384197 +

Link to JBrowse

Properties
Property NameValue
TranscriptId245671
ProteinId245585
Product namePermease for cytosine/purines, uracil, thiamine, allantoin-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1381497..1384197 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015205nucleobase transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015931nucleobase-containing compound transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|245585mRNA_569-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|245585mRNA_569Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|245585

>mRNA_569-protein ID=mRNA_569-protein|Name=jgi.p|Nanoce1779_2|245585|organism=Nannochloropsis oceanica|type=polypeptide|length=713bp
MEDVLSPASSLDPVGPNSKTWLFRDYFWIVASLALSPQAYMLGLLGIGIG
LTWPWCLVASFLSALLAAVLASLTCHAPSKYGVPLTVAARASFGVFGSKI
FSLLHLAIALPWAAWLLCISSEGLRVGITRFRPSLADWAPLRSSLLPAGY
PSLLSLLCLVATALLLLVLHIFGKVHALRSLASTVSTTLLSLYLGLAIWA
TRLVGFQSALVAYNTKLLPATLPPSSPLSLYIALPLVVLAGLGCWSTPLL
LGYGDVARWCSLRSAPRRALLLVFPLLTPLTTFLGCLLMGAIAKGWTTEA
TTPTALLRFLSPPLMALIVGICFCLAFLHTTLQGYLLSASHALTDVLGPR
LLRNSTIAGSFLVLASFLLALIAPSTLLDSSDARSGTGSLSLSSWSLTSG
LVAGAMSGVLLSDYFWMRPTTLPVDNLYKTVPRLHACGVNAGALVAVLLA
FVVFGLRSVLRAVVPLTRGGRGVEEKGEEEVTTVLELLNAMCFFTTFPVS
FLAYALTYRCFTASLPSPPPSFTSSSSSSPPVFHSSVERGVGISEGRTAN
RAERQYATAAAATAAATAAGATSSCNHRETYPPGTRPPRLSAHRPSPSQQ
SASSRATEQLTATLHQLLLHSPPPASAPPATLHEAPPTTGILPSSAPLSL
PRQGGPESGEGRAKGDIERYRDVPTSLGPGNGRDEETKMEKEGGDILYAY
AVRVHEVDDARK*
back to top
Synonyms
Publications