jgi.p|Nanoce1779_2|589863, gene_5657 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|589863
Unique Namegene_5657
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:235586..237274 -

Link to JBrowse

Properties
Property NameValue
TranscriptId589949
ProteinId589863
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:235586..237274 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004066asparagine synthase (glutamine-hydrolyzing) activity
Vocabulary: Biological Process
TermDefinition
GO:0006529asparagine biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00880NO14G00880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589863mRNA_5657-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589863mRNA_5657Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|589863

>mRNA_5657-protein ID=mRNA_5657-protein|Name=jgi.p|Nanoce1779_2|589863|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MSEPDVNNAAISARELLHAAVLDIAQAQFDKLPRPEECIVLFSGGVDSSV
SLHLAASLLGVKHAITVLVQDTPASDEPWAEATAENFPGVTHIVLRPTLD
ELLGQDMPFLVQTIHSFDGMALRNSVCATHGLRHAASLGFKYVLTGDAAD
ELMGGYRFTHRYDDEAWTQQRATMVAKWHFDSSVVGDALGMRVTSPFLHP
PFVDFCLKSLRKLDCVGPYSLRVTPSAALEDGVITGKLPLRGAFPELLSS
SRRKDPQEIGCGTTMLGAAPWASPPRQGYFDTRIEDAVLASEKARIADEY
AIKIRDKEHLAYFHEFEKLFGIIEEVDDEEKKRVTKKVLNVPNKPRPNDD
PCPACGFKLDTPTQTFCLVCGHYEETLRFRKQGDKVGGVARTGQDDVEEI
EQ*
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Synonyms
Publications