jgi.p|Nanoce1779_2|555410, gene_5620 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|555410
Unique Namegene_5620
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:145905..148539 -

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Properties
Property NameValue
TranscriptId555496
ProteinId555410
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:145905..148539 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00540NO14G00540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555410mRNA_5620-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555410mRNA_5620Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|555410

>mRNA_5620-protein ID=mRNA_5620-protein|Name=jgi.p|Nanoce1779_2|555410|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
MGIAFGKAAMTNLMLCYLPVNKTSLWTYIFGISFERAVKFHRHLSYLMLA
YSILHLGLLIEINPVWGLPPKLNGVVMAYGLWALIAFLIMTVTALLRRWH
FELFRYTHYLFIAGTVLTLLHVPKALPYMWMPCLVHAADFFWRWWGVLRD
ISVAKLSIFPDHIAQLDVFSQVPGGPKSILSSCTGRQERKWTKPIEPGSY
VFVCIPRISPWQWHPISISTAGMSVLGGSAIEPSYSLHIKGLGDGTWTDR
IYRLAASRSLTVTPISEDMVDGPYGKLSIDLSNYRKLVLVAGGIGITPMT
TTLSFISHQKRHHQLPLLESVILVWAVRNKTLVDGFIPFLDQTFSQLNSL
ETPSFFKVELYVSIGSKSAAVPAAADAAGSARVIVSVGNGDENSEMTREA
EMNGASAEVEKREVKQTIRIGNKSPEEGSGTAVSAAPSLFNIHYERPDIA
RVMEGLFGEKEKVSEEVGVLVCASKALLFEVQRQCVRWDVDLHAEEFAW*
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Synonyms
Publications