jgi.p|Nanoce1779_2|31963, gene_5601 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|31963
Unique Namegene_5601
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:82214..84742 +

Link to JBrowse

Properties
Property NameValue
TranscriptId32049
ProteinId31963
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:82214..84742 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00350NO14G00350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|31963mRNA_5601-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|31963mRNA_5601Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|31963

>mRNA_5601-protein ID=mRNA_5601-protein|Name=jgi.p|Nanoce1779_2|31963|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MAEPGPVVMPKASLYPSTPPSIMLHIPSLMLGAWLALNNFVIQTLTRSLP
SLPPSLPSSFPPSRPRRIPPPWCADKFDPLPPGPVDAEGNPLQIEIPRSR
GGARGGGRGGGRGGGAGRGRKRRSPSPSPSRYPEKFYSDDDDEAGEEDVI
LSEDEGEGGGGGGGGGGGGGSAEKGLLQLRVKVRREGGGGAGGKPPLHSP
RLPPGPPPPVAEPPEHQPWDGPSLPPPPPSIEPLSSSSLKDGSLAAAAAA
AAAAAAAAAGAGDRKRKKIQHNKQSQQAAQTTGGDGTGASPPSSSSSPSS
PVTSWPAPPPPGHAAAGAAAGAAAAVTGAPLPPPPEAGGRQWTPQEIHSY
YYPQWHNHPPSHPPSSQAPAAGAAQQQQQGNGPAYPFPHPHSLHHPSPYH
PYGFPPPPHGAYPPSLHPAFPPPNHQYPHAPPPPPFASAYVPPPPPSSVP
ASDSTTGEPPSSLPASSSSSSAGNTTMASSASSTSSSNSPSPSLTAATAT
GAAPPSLPSSSSSSAQQHDTATAIGVMPLPPPSSSEGGMEEGHPSSTYAG
VHWDGGKKAWSAWLTLPGGEYQCLGENFGDEQEAVAAQGEAIANYYRTLG
MEPPPPPPPVTATTMAVKEGETEGEEGGGEGKGMDVVVGEEPVAAAAAEV
AVVVAAADMAATTTEGEAGKEVKEEKEEEEEQQQQQPDEPQKEEASEGTK
EAVTALLHVSKRAAGVGEEMEGMVMAAEAAGAGTTSASPSPDR*
back to top
Synonyms
Publications