jgi.p|Nanoce1779_2|592607, gene_5465 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592607
Unique Namegene_5465
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:481778..483427 +

Link to JBrowse

Properties
Property NameValue
TranscriptId592693
ProteinId592607
Product namePurple acid phosphatase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:481778..483427 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004035alkaline phosphatase activity
GO:0003993acid phosphatase activity
GO:0046872metal ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL015ncniL015Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02930NO12G02930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592607mRNA_5465-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592607mRNA_5465Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592607

>mRNA_5465-protein ID=mRNA_5465-protein|Name=jgi.p|Nanoce1779_2|592607|organism=Nannochloropsis oceanica|type=polypeptide|length=330bp
MKVLFLGAAVLLFALPILIQARHHKPEQIHIAFGQTSDLVAVQWSTRSYV
QPQQQQQQQQQVEEPLQPHSFVRWGKDPAHLDNVAEGLTVDFIDGGKTKR
RQRHHIVNMTGLEASTRYHYQVGDETLSDGLSQIYSFKTAPDAATLADNL
PVRLVVYGDMGVDLNGSTVIRHLLKHLNRDPDLFDGVVHVGDFAYDMYER
EGKQGDFFMRQIEPIAARLPYMTSMGNHEKAYNFLHYSERFRNMPVSDGE
VASKNGPNAPNNWWYSFNLGPVHLVAVSTEIYDFGPLDYIPRQYQWLGTI
SSPSGRSLRAFLMYPLPLCPSPLFSTSRT*
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Synonyms
Publications