jgi.p|Nanoce1779_2|592265, gene_5363 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592265
Unique Namegene_5363
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:249937..251988 -

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Properties
Property NameValue
TranscriptId592351
ProteinId592265
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:249937..251988 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003996acyl-CoA ligase activity
GO:0004774succinate-CoA ligase activity
GO:0015645fatty acid ligase activity
GO:00188543-isopropenyl-6-oxoheptanoyl-CoA synthetase activity
GO:00188552-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity
GO:0018856benzoyl acetate-CoA ligase activity
GO:00188572,4-dichlorobenzoate-CoA ligase activity
GO:0043759branched-chain acyl-CoA synthetase (ADP-forming) activity
GO:0043762aryl-CoA synthetase (ADP-forming) activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02050NO12G02050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592265mRNA_5363-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592265mRNA_5363Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592265

>mRNA_5363-protein ID=mRNA_5363-protein|Name=jgi.p|Nanoce1779_2|592265|organism=Nannochloropsis oceanica|type=polypeptide|length=573bp
MEKKLSMPSLQLFRQLVKHGHRTAIVTSQTGYSLTYREILREATRVSAIL
EQTAGLPSSSPTSSSLRPVALLAPRDHSFCVGHIAVLHAGAAVVPIHSHN
SPAETEYILRDAGCRQILLHPQLRSAVETVLYSAKGLDIEIVELKVSESH
AIDADTLPSYAIAQGKKHMEASRSASQDLEWFKMSESTDAMIVYTSGSTG
RPKGVVKTHAQLAEMCRAVAEAWAYTPTDRVLEFLPLHHLHGLLNKFLAV
LWAGGAVELLGSPAAAAIWRRLADQTKPPLTMFHAVPTIYSLMLEELESG
RLDGASQANALKHLREMRLMVSGSAALPQSRFFEWEVLTGHRLLERYGTT
EAGMILGNSLTPMSARFPGHVGAPFPGVEVRLVDPDTGADVTRKPGKQGE
VRVRSPKGLFSRYLNQPEATCQAFDDDNWYKTGDMGEFDTEKGFKILGRL
STDILKSGGYKLSALEIEAAIGQHERVAEVCIVGKPHPLWGDEVVAVVRL
KKGEGEGEEDSSSSNSLNSELTMEDLRTFLAGRLAPYKMPRVLHVVKSLP
KNAMGKVNKKTLLKDLGIIDEV*
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Synonyms
Publications