jgi.p|Nanoce1779_2|64033, gene_5348 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|64033
Unique Namegene_5348
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:217273..219122 +

Link to JBrowse

Properties
Property NameValue
TranscriptId64119
ProteinId64033
Product namePeroxin-3-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:217273..219122 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
Vocabulary: Biological Process
TermDefinition
GO:0007031peroxisome organization
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01910NO12G01910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|64033mRNA_5348-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|64033mRNA_5348Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|64033

>mRNA_5348-protein ID=mRNA_5348-protein|Name=jgi.p|Nanoce1779_2|64033|organism=Nannochloropsis oceanica|type=polypeptide|length=445bp
MESLSKAYHFLRRNRRAIGLVAGVSAAGLAMWRVKRVLDEYKRLIKEHDV
ARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVNEIVDVTSPVKALKAG
RGELSKEQEQALWQQVKVSGFTRFFLAYYGFTLLNVMLRVQVHILGRYAF
ETSRREIDGAQQQQQQQQQHTCSLNDEQVYAAAGAPTFGADDRCKLLSLV
YEFFLGEGLRRLKESVEIVISEELGGWSVHDKVHVGYEELHDAFSRIRRR
MEGPRGVTTAELPLLQYIVDMSSITEDELGGGGNILHEMVNETWDALESP
SFKLAVEDCLDATFRVFLEDLFVCLYASRPAPASLASKTIGRMRNVEEEE
DAKGRMGEGKERGGFLQEPQETGQDSSPESNPGQGGKASDKDPPLAKLIP
HMKNAATKVFNNDPQSNEYIRVTAQNRSVNLLCSSFFTTEISFV*
back to top
Synonyms
Publications