jgi.p|Nanoce1779_2|592199, gene_5342 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592199
Unique Namegene_5342
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:205064..206754 +

Link to JBrowse

Properties
Property NameValue
TranscriptId592285
ProteinId592199
Product nameCytochrome b5-like heme/steroid binding domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:205064..206754 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004128cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0020037heme binding
GO:0046914transition metal ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01850NO12G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592199mRNA_5342-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592199mRNA_5342Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592199

>mRNA_5342-protein ID=mRNA_5342-protein|Name=jgi.p|Nanoce1779_2|592199|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MATGTPTNKTALKKGFGLMDWVKLTTSTSDLSGMLRMGGMRGYRMDEVAK
HTSAGDAWAVFGGKVYNLTPYLPYHPGGAGIVVKAAGTDCTALFNKHHPW
VNFEGLAGKLMVGYLIEEGGASNGSAASAASAQTVTATASSASAKGRIET
DPPSTIATKDCKSQPALSVFAMDSPSLPPQRIVVSAVFGTGEESEEEGVE
EQEVGRGEGR*
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Synonyms
Publications