jgi.p|Nanoce1779_2|630874, gene_5197 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|630874
Unique Namegene_5197
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:714373..719698 +

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Properties
Property NameValue
TranscriptId630960
ProteinId630874
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:714373..719698 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016874ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02960NO11G02960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630874mRNA_5197-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630874mRNA_5197Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|630874

>mRNA_5197-protein ID=mRNA_5197-protein|Name=jgi.p|Nanoce1779_2|630874|organism=Nannochloropsis oceanica|type=polypeptide|length=1723bp
MDFLGTLLCQISCEKLPTDYDRAAKVEEQEYVPGVVRSASTLPLLKYQDD
NDADAVNVKFNDIPYKNEDHLGRKQATMLALYGLLMKRYMREPEIELAMI
IERGAWVGVPLHGVAGLEISIIEAAKKIHTLLQDHAPLNSFVSIDGDDLS
TRAFVVRDNMLISPPREWPQLSFVTPLLSCVADICMILEEDHFFTLLYNK
RLFSSNMMEAMMRCWETLLTHACQDMSVRQDLVPVVSPMDTKRMVSEWNQ
TEMLFLPLRQGIHELFEARVDEAPSRLAVVGPVSEEESDIDHYPARVQEV
TYGELEQQANRFAHHLRRQGLQNEDIVSIFLERSVAFYVVMLGVLKAGAA
YVSIDTDYPDDRIQFMLEDSGAVALVTMQALAPRVQAKEEMSHRPFRLVI
LDDPLHSAALAQEPPTRLLRTVISHAVEAPCYVIYTSGSTGRPKGVQISH
ANALNLIQAEAYIYGIRPSDRVLQGFSPSFDASVEEMWMALHNGAALVVG
TKELMRSGPDFPRYLAVLGVTCLSTVPTLLATLGALECCQNGDNWDTQLL
PNVRIIITGGEACSKELMARWTTCGRRFFNTYGPTEATVVATYKEYGTTA
SFESSVHRITIGRPLPNYQIYVLDAHLNLLPPGALGELVIGGVSVSRTGY
LNLVDKTQDVFKPDPFRSGKSCRYPLYQSGDLARISLAPDSMGEIEYYGR
TDAQVKIRGYRVEPSEIEAVLCGLPGIQCAVIDVQQQGPGTMKQLVAFVV
PAAGDEGTLFLNTAAVMQAMREKLPAFMIPSHIEPVTAFPILPSGKLDRR
RFPQVLRPASRRAFGKSLTRSLSRVLGASCDVSVARTGGDVLEEEHDKHR
RAVTSAFEHVLGLPAKTLASPKATDADFFDLGGNSLLVSMLVTKLRHKYP
AVAARDIYNHSAVGSLSDVLRSLSPKTASAATSTTAPQFVTLNSEEERPY
ATKLTDGCSQVSSASSPPYVPCMATTILADLVQLAAMYIVAAYMGLNGLG
VYLLYFNYKDLPTLKLLAMLTGVSVALIPLAFVVLVATKWLMLGRVQEGD
HPLWQSYHLRFWFVQSLDSVFRLFYMASLKGTPVVAWYHWALGSRMGRGI
YLQGSLEGYDLVTIGDGCTLNCQANVSAVSIEGNYLKLRKVILGRGVTVG
VRAMVQSEVCMDDYCKIEALSLVPSATRVPTRQIWAGAPIVFVGFNEDIG
SAPTGTSGIIGILQILWGVFEKVLEASFLMPFLYMLRAVPVPSVTEDDPV
ATRWHAAGTTLLHVTWLSMVLQIGIFFARTCLVAVLKRLLLLGGLQEETT
YPLSSWTFFRHWAVDNLMDSLAVYTKQLRGTLYLPLWYQLMGAHIGHYAE
ISAFENVCAERLTLGDQVFVADDVMLGMPHVDSGIVTQQPVSIGDRTFVG
NNSVVEGGTHLPQDVLVGVLTLPPSQRATTAPGETLLGCPPFRVQKRAEL
SYHAINTYTPPSWMVFVRYVVEGVGFLLLQISLASCFALLYVSMTWCYNG
NNSSASLVTYLLTLPLLVIGEGIVAAFLTLFWKWVVIGRYRAGSYPLYGI
YVWRTEFVERIEENLLHTHTYPLISGTVWMQLVNQAMGVRMGCRAYLEFP
YFCEPDLCTVGDYCNMERTASLQAHLFQDRVRTTGPVKVGNFCSLGSDSV
VLLGAVLGDHCALSSMSLVLRSEELPSHTQWHGLPAVKLLPGVRDARKYN
DEEVQEAGAVAVEAAGRVREGK*
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Synonyms
Publications