jgi.p|Nanoce1779_2|647864, gene_5150 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|647864
Unique Namegene_5150
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:581568..589781 +

Link to JBrowse

Properties
Property NameValue
TranscriptId647950
ProteinId647864
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:581568..589781 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02510NO11G02510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647864mRNA_5150-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|647864mRNA_5150Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|647864

>mRNA_5150-protein ID=mRNA_5150-protein|Name=jgi.p|Nanoce1779_2|647864|organism=Nannochloropsis oceanica|type=polypeptide|length=1219bp
MTTTRLVRPPRLLGFGGRPYNFFERDALPQNLSSVLKGKFAAVLMVEGAL
IFGDDQGHITFTDADLRLSLQHRILSPPPLTSFLVLSFPPACPLPAIPPP
DCLSLGGDGDNLVTIAATPTALACNHNGTKLVIGFKSGLVVLLEGDFAKD
RARFQPPTILLRPPSLPSSSSSSVEGACRAVTGLIFMQMPEEGGRDSTVM
VSGTGKAAAFGGAGGERRGKQVDPDRLYVILEDVLESSSSSTSTTGSKSC
ASLDLSTQDLLIGRRDALYFYSEEEGRKGALGFHVHQRLCTLSSLPPSSS
SPSTTTSSSILVASTDEVSGRTTVHVYDLLNKIVAFQTTLPADQKIISLL
SEGALAYVVTSQGQVWRLREKSIGAKLKLLVQDMKLFPSAIKLSNLSNYP
LFPVAIKLAYSSNYPVAQIMEIYRRYADYLYEKKRAFDESVQQYIHTIGY
LDPSYVIARFLDPQRSDNLTAYLEALHRQGQATADLTTLLLHCYTKMKDT
GKLDKLVFPERYLEGGEEEERGEEEEEEMEEEEAEEGEGKEGGKKGEKVP
FFPAGLALLPPEEGKEWEEEDEGGGGRDGGGECEYGVESGEAAKADEDEE
GRGGRGTNGSSQPMTGTFAFNLKSPPPRTQRAPAEDFLHLFVDHPKCVVA
NALLDLLIQDWKEAAAAAAAAAASAAAAPVPTPASSALSNGTNIINNKSV
PTPFSPSSRLSETNGMKSSSAPTMKEQVKHTVASLKAAESALLSFLETYH
GRYDEDQALVLVQMHNFKPGQLLLFDKRRQVEMVLEHYMEAGEVGLVLQR
MGRKENKKNAALWGKVLAWVVGRAGKKERKEGSEEKESDDEEVEDDEDED
EEVSEEEEAVWDDVMRVLQMVEREHVLPPHLVIDMLSQHANLPLFVVRPF
LTRLLKEAYSDVHTSQQKINSLRKSTTEKRAEVKDLRSTARLFQTTTCTS
CRRPLELPAVHFLCMHSYHLEQSCLAQEGKCNECAADHHHYERIQLKDQR
GKAMEHELFFSELEDQGFAAHPSSTSATKSTITRPPARPYGPRLLRGLAG
DIFSVTEGGYHYKLKMFDSVSQRKTTENEPLLLGVWDRWEVVEREEEVVG
EMGKRRGKALSLRMVYMDGATCMANTSVVRTVLVDFLCAASPIPRADESA
ASAAIITDGDAVALSNDDDSTGTNLVDRVVKAREEGRVVQEGEDAAAVFV
QEVPLLLLLLLLLLFAAR*
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Synonyms
Publications