jgi.p|Nanoce1779_2|591409, gene_5107 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591409
Unique Namegene_5107
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:481539..482897 -

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Properties
Property NameValue
TranscriptId591495
ProteinId591409
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:481539..482897 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000907sulfonate dioxygenase activity
GO:00186022,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
GO:0019798procollagen-proline dioxygenase activity
GO:0043734DNA-N1-methyladenine dioxygenase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02150NO11G02150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591409mRNA_5107-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591409mRNA_5107Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591409

>mRNA_5107-protein ID=mRNA_5107-protein|Name=jgi.p|Nanoce1779_2|591409|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MKRPRTRTSTPNPLLFILFLPSAAALRTSFSRGHVPRLDARTLASQQALD
DLIMAGPCLLTHAFDKDPGTRKMSDEAFSDSFFKDFQDVEVMVQIKKNAR
GSRPQFYTGTLAEILDGMMEKSTHEEAWYLLSENMLDNALDCKMKEPLVL
PSSLFGGFDYFDLFPPKVRPKKHCLILGGTGGRSFLHADPFEWTGLNYLM
EGQKLWTFVPPSVPRAALALERVKPDAWGEDVSAGWKSAVHDLYHTLPYL
SSSTVALDFPAELQGVEGVQTVVQEEGDLVIIPPGWAHQVYHLQPSLCLA
WQICNALNFKSVIRHMLVWSVESKKNEKQQQRRRRRKGDGERMEEREREE
GEKVDVVALVEAIWKEHEGRKGEEERMRVTATIERAIKAAMVLRYGPQKA
KEAYKGLWEAL*
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Synonyms
Publications