jgi.p|Nanoce1779_2|591362, gene_5094 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591362
Unique Namegene_5094
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:437932..439794 +

Link to JBrowse

Properties
Property NameValue
TranscriptId591448
ProteinId591362
Product nameGlycosyl hydrolase family 79, N-terminal domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:437932..439794 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591362mRNA_5094-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591362mRNA_5094Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591362

>mRNA_5094-protein ID=mRNA_5094-protein|Name=jgi.p|Nanoce1779_2|591362|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MALRGALDGLLALAPGPAFKAPTAQVINLSLGANIIARTGEDYICATTDW
WPPNKCDYGICAWSNTPYGPNPSIPNLDLSQPLFKAAFDTLSPFIWRLGG
SLQDDITYEEPGNPAVVCPPITDDPTAKWGFTGGCLNRSRWSEIANFAKD
HEAKLVFGLNGLKGRVHVEGKQWEGMWDQSNAKSLMTYTKEAGLPIYAWE
LGNELGGFNGIQAQLSARDVGQDFVTLRGMVTELWGEGEEAPLVVGPDTD
LDIPWFTEFFEAAQGSLDGVAIHMYALGAGVDPTLAGKIINPSHMAKATR
TAEDLTQLMQGLVAKNVGGVVKMPQLWMGEDGGAYNSGQNGTTNRFTAGF
WSLNELGIFAKNGFTVYCRQTLLGGNYGLLDKDTLLPNPDFFNYLLFKRL
MGREVLRVESSSPEVTVYAHCTRKGGKEDELQGLEPGAVTVLIINFMAQH
DAQIGVLKLEGEWRDLLPEPRLEYTLTSGMPGKLNGTFSLLNGSPLQVSS
EGVYPAMDPLVVKKGEDLVLPKQSYGFYVFPKAGVRACM*
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Synonyms
Publications