jgi.p|Nanoce1779_2|591062, gene_5004 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591062
Unique Namegene_5004
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:218214..221010 +

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Properties
Property NameValue
TranscriptId591148
ProteinId591062
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:218214..221010 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0007165signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591062mRNA_5004-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591062mRNA_5004Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591062

>mRNA_5004-protein ID=mRNA_5004-protein|Name=jgi.p|Nanoce1779_2|591062|organism=Nannochloropsis oceanica|type=polypeptide|length=466bp
MSEIDSLFGALGDTGDVDADLSILEALCGLEGIDASAAAAAAVEEEQSDE
DEEDSFDGDGQPRKKRARRTRSELNEVEKQRTRRINEQIQSLRALLEASG
LNTKKDKFSILKNTTEYLKKLKLLLNKSQAQIQALVASRRVAAAANAASA
AAGGGMAAAPAPVVTVPLALPKAGGVEDTKYYVDVDPNVTQGAFAGRDVG
GDDGGRVPQAGTALEMMIQRPPIAPGTVAESGSWAPNKKSADYALMFQNA
SIAMAVASLDGNFVDCNGAFSIISGYNNREVLQRSVFDLTPAEDCQELMS
IVGKMMESPAESAKHFWKRCCFENRDCHCFVSMWLVRKASGEPVYFQCAV
LPLEDYPMSSKSVTYDASSQGKELAERGEGEDGGTVHAIEGQEEVQVSEA
NTLLQPEFRCGEGEGEAAIGRGGGGREGDLQFELPAPRSSQFTEKGLAVG
ASGECHDRPSPSSSS*
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Synonyms
Publications