jgi.p|Nanoce1779_2|524140, gene_499 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|524140
Unique Namegene_499
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1207538..1209008 +

Link to JBrowse

Properties
Property NameValue
TranscriptId524226
ProteinId524140
Product nameNAD-dependent glycerol-3-phosphate dehydrogenase C-terminus-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1207538..1209008 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0009331glycerol-3-phosphate dehydrogenase complex
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0016491oxidoreductase activity
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0046168glycerol-3-phosphate catabolic process
GO:0006072glycerol-3-phosphate metabolic process
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04750NO01G04750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524140mRNA_499-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524140mRNA_499Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|524140

>mRNA_499-protein ID=mRNA_499-protein|Name=jgi.p|Nanoce1779_2|524140|organism=Nannochloropsis oceanica|type=polypeptide|length=358bp
MVLNPAKGQSPLHKVSIVGSGNFGSAVARLLGRNVLQHPKHFETDIRMWV
FEEELPDGRKLSEVINAEHENVKYLPGVRLPSNVRAIPDLEVAVRDASII
IMVVPQQHCATLLPRLRSCIRQGAVAVSLIKGLDFDDNGPVLITDLIRKG
LGGDVEVCVLMGANVADEVARDEFCEATVGCRDTTGAGLLVQRLFDCPRF
RVEVAPDPMGVELCGALKNVVALGAGFCDGLGWGGNTKAAVIRRGLLEMR
RLCKLLDPHVRDATFFESCGVADLITTCYGGRNRKCAERFARADGNMSWD
DIEKEQLGGQHLQGTKTAANLHSLLERKRVVGDFPLFSTVYQIAFRGRHP
RTLVNDL*
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Synonyms
Publications