jgi.p|Nanoce1779_2|554710, gene_4773 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|554710
Unique Namegene_4773
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:604768..607130 +

Link to JBrowse

Properties
Property NameValue
TranscriptId554796
ProteinId554710
Product nameCyclophilin-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:604768..607130 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G02210NO15G02210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554710mRNA_4773-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|554710mRNA_4773Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|554710

>mRNA_4773-protein ID=mRNA_4773-protein|Name=jgi.p|Nanoce1779_2|554710|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MAYSTSSGKNNKRTEMQVYMDIKIGPRFAGRMIFDLFTDQTPRTAENFRA
LCTGERGVSPLSGHPLHYKGSTFHRVIKGFMAQGGDFTAGDGTGGESVYG
AKFADENFHCLHTERGMLSMANAGPNTNGSQFFLTFRDTPHLDGKHVVFG
QLVEEGGGMDVLRMIEAVATDGRDKPRMPVVVVECGQVGERVRDEEEEEE
AEEVKVGVPGKEKGKKKGQQEENEGDEDDFAEEEGKGQRGRATVQVEEEE
VEEEEEVEEQEEDISGMTDAQRRLFQLKLRLNQGRKLNRLAVKEEHARKS
TPNYEAKLRAEERKDSNERWRRELLSRGVKPEEAYLFETAEAAGKKMAAA
ARKEKGKAAFGWDVFNQDALYKAYKKRLAKLPSEGGEGKKRGEEPDPLAY
GTAGKGDEEGLERLADELGEREKARKNFSRRRAEYEGADVTSINERNKMF
NKKLKRAYDKYTVETRQNLERGTAL*
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Synonyms
Publications