jgi.p|Nanoce1779_2|587355, gene_4648 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|587355
Unique Namegene_4648
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_9:296836..298562 +

Link to JBrowse

Properties
Property NameValue
TranscriptId587441
ProteinId587355
Product nameEAP30/Vps36 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:296836..298562 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL006ncniL006Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01060NO15G01060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587355mRNA_4648-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587355mRNA_4648Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|587355

>mRNA_4648-protein ID=mRNA_4648-protein|Name=jgi.p|Nanoce1779_2|587355|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MLDPFQRFWQELPLLPGTTRPPLSEYEVECLLRDKVALIDGRSNQVVHTG
GLVILTSHRIIWHCQTQSRAYHGHLSKVVDARKSHNIFKPSSRVHLYLQG
PDQHRDKPATKIDFVHGGRDEFLAQVKTLLQMRDWEKVPASSPTSGSGRS
PAVAAATASAVPVFTARKAGVGGIIRRQENTRAAQDKLATEAFGDLQALM
GRAREVVSVIERYATVLASKAEGEGAGSGNGGGQEDAELQGLLIDMGIFN
PVTRVSAGSLYHKELARQLAQFLTGGGKSSRATGGMLAARGGMMTLHDTY
CLFNRARGTALISPEDLLDACEELESLQLGMRLHRFPSGVSVVQAQEFSE
QQVSGQLRALAEAEADGSLTALDVATHLQVSLTLAQEFLRAAEARGQLCR
DESAQGMLFWPNRFPDFIESTHQGANDAH*
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Synonyms
Publications