jgi.p|Nanoce1779_2|589167, gene_4449 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|589167
Unique Namegene_4449
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:625430..627873 -

Link to JBrowse

Properties
Property NameValue
TranscriptId589253
ProteinId589167
Product nameGlycosyltransferase (GlcNAc)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:625430..627873 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01060NO09G01060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589167mRNA_4449-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589167mRNA_4449Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|589167

>mRNA_4449-protein ID=mRNA_4449-protein|Name=jgi.p|Nanoce1779_2|589167|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MPRGRTAVPYSYGMLLLLLLGVMELVPAEPGKWGKSAVFVKGQWTPFDEN
DEAGVPQPYPPRTDSWMQNDTSIMVSISSFRDYRCPKTLYNLFTKATNPN
RVFAGVVQQNSHDDADCLYGYCEMIKEERGLEPKTPATGPAAKVLENCPH
ADQVRMLRVSSEDAKGPTYGRYLGSKLLGSEEFCMQIDAHMDFEDDWDKQ
LLDMWGLTNNEYGVLTTYVPNFDQLHLNLNNRYEVPQICKVLYTKPENMV
RNEQATNCIWLSKPKLTASWAAGFSFNKCHADLKAPYDPHLPSLFDGEEY
SKYARMWTRYVNPSSF*
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Synonyms
Publications