jgi.p|Nanoce1779_2|588615, gene_4287 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|588615
Unique Namegene_4287
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:198471..200684 -

Link to JBrowse

Properties
Property NameValue
TranscriptId588701
ProteinId588615
Product namePeptidase family M41-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:198471..200684 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02610NO09G02610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588615mRNA_4287-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588615mRNA_4287Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|588615

>mRNA_4287-protein ID=mRNA_4287-protein|Name=jgi.p|Nanoce1779_2|588615|organism=Nannochloropsis oceanica|type=polypeptide|length=555bp
MGGGGMGMPAAGAALGGADPGQPLYVTMVEPGFKQQLWKTFRFALFVFLV
ISGLSALIDDKGISSKLMMSTNLHMAESSDKRFDDVMGVDEAKQELEEIV
LYLRDPSRFTRLGGKLPRGLLLLGPPGTGKTLLARAIAGEAGVPFFYASG
SEFEEMYVGVGARRVRDLFEAAKKRSPCIIFIDEIDAIGGARHLKDQQAM
KMTLNQLLVELDGFEQNKGVIIIGATNFPQSLDEALLRPGRFDKHVQVPL
PDILGRKQILELYVKKIPTDEDVDLDILARGTPGMSGAELSNLVNEAALK
ASIDGLKAINMATFEYAKDKIMMGSERRSAVISKETATVTAYHEGGHALV
ALKTGGADPVYKATIMPRGQALGMVTQLPDGDQTSMSKKQILARLDVCMG
GRVAEELIFGAENVTSGASSDIQQATRLARAMVTQWGMSDTVGLVFHAKD
GGEQSPETRAAIDREVKSILDASHVRAKEMLLKYKSELDVLAKALLEHET
LTGPEIIDLLAGKKLSKPKVAPRASMAAEAPKQGGAAAGAAAKPGILKGG
RLGA*
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Synonyms
Publications