jgi.p|Nanoce1779_2|586708, gene_4146 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|586708
Unique Namegene_4146
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:940647..942951 +

Link to JBrowse

Properties
Property NameValue
TranscriptId586794
ProteinId586708
Product nameputative Phosphoglucomutase, cytoplasmic 2
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:940647..942951 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004614phosphoglucomutase activity
GO:0016868intramolecular transferase activity, phosphotransferases
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00740NO10G00740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586708mRNA_4146-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586708mRNA_4146Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|586708

>mRNA_4146-protein ID=mRNA_4146-protein|Name=jgi.p|Nanoce1779_2|586708|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MSTPAVSAVIREREGGVAVGGIILTASHNPGGPEEDFGIKYNMGNGEPAL
EAFTDAVYAATLNIEEVQVLTNCPKVNLDKLGVTRVGDMVVEVIDPVQDY
LAVLKEAFDFDLLKAFIARPGGFKLVFDAMHGVAAPYAQVVLGQELGCPP
SSFLHPDSKEDFGGLHPDPNLAYASDLVKTMGLLPSGAPVPPSADSEDVP
DLGAAADGDADRNMILGKRFFVTPSDSLALIAANAEAIPFFRDQGGLKTV
ARSMPTSQAVDRVAKAKGLNCLETPTGWKYFGNLMDALALGGKEEYNPIL
CGEESFGTGSNHVREKDGLWAVLAWLSVLAHHNPEGDAPLKPVSAIVQEH
WAAYGRNYYCRYDYETVDADAANAMMAHLRAPDFMPGMTINGFTLTEVDD
FAYTDPVDGSQATKQGVRLIFGDGTRAVFRLSGTGSTGATVRMYLEKYEP
DVTKQGLPSSEVLKPLADLAIKLARLEEFTGRTAPTVIT*
back to top
Synonyms
Publications