jgi.p|Nanoce1779_2|415522, gene_3830 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|415522
Unique Namegene_3830
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:141076..143609 +

Link to JBrowse

Properties
Property NameValue
TranscriptId415608
ProteinId415522
Product nameAlg9-like mannosyltransferase family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:141076..143609 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03800NO10G03800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|415522mRNA_3830-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|415522mRNA_3830Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|415522

>mRNA_3830-protein ID=mRNA_3830-protein|Name=jgi.p|Nanoce1779_2|415522|organism=Nannochloropsis oceanica|type=polypeptide|length=673bp
MPPRLRSNTKSRGDSTCPPSPDSSRKDLMPQVKAPRQRPRGAARAAFAAF
VTEISLLDLLLLAVILLYLGLCPYSKVEESFNMQATHDLLFLSPFAPSSL
ASYDHLSFPGVVPRTFWGPILLALPIHLLLFPLLSLLPSPLHPTTKHPFQ
LIVRGLLALYLWIAFLVFRQAVTWRFGRRTGQCLLLLTLSQFHLPFYLSR
TLPNTFALAFVLLSYACLLRRSFTPALLLLALATALFRCDIIVLAAPLLL
LLVLLRHLSFSRLLVLGPAFGLVGILLSVVIDSHFWGRGREGGSSWVWPE
GMVLFFNTVENKSREWGTHPWHWYASSALPRALLASPLLWPFCLLPPRRG
GREGGRAGGKGRAKSGMILTLPLPRSLPLLELDLEPFLLLFLPIAAYLSL
YSLLPHKELRFIFPALPVLNLCAAVGWARLSERGEEGRKGKGGKGKSLSM
SSLSVRFCCACLPGWGVMLLSLFTLPLFLAASRKNYPGGEGLRTFHVEIV
PPLFSTFLPLVTPTGKGGGRDGGRDQVKLHIGVLAAQTGVSRFGEVWREG
GRERGVDVVYDKEEGLSLLERMRRYDFLLLEKEEAEEAIRKREERNEGEK
GKECAVMKWVEGLPCARRPKEILWNLRKELMEVAARLKGKSDRSSSSSSS
KTEGWENIFVKTEPVLALVICH*
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Synonyms
Publications