jgi.p|Nanoce1779_2|583394, gene_3777 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|583394
Unique Namegene_3777
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:1229765..1231931 -

Link to JBrowse

Properties
Property NameValue
TranscriptId583480
ProteinId583394
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:1229765..1231931 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583394mRNA_3777-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583394mRNA_3777Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|583394

>mRNA_3777-protein ID=mRNA_3777-protein|Name=jgi.p|Nanoce1779_2|583394|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MPWSLFPPPALIPALGSTLPSHAAHDRATDAQAQLRAHILSCQRHLNNHN
HHHSHFDKYQLQQQQWEGWLRAALGLANIVARVRVLEVLASIEAISGEMN
GRGGKGAGGRMLLMLPLPSSSSNVSAEMPPSPHEARQEEQDQHQHQYQHQ
HQQQYEAVPSSPPSLPPPFSLSAACLLLREIKHFLEAYVDEEEEEEKGEE
IEGVEKDEVKEDEVEKEGRPEHKYGEKSVLDCLLTCMGRLARDAADRKKQ
EGSSSSSSEDVLETLKTQYIDGLCPLWLNLARRPSSPSSSTTATTAAADA
SLSLSRSDASSLPHAKLNGRTGARASSISSRRSSSSINGYMVQRSRRTYV
ALQLLTRLLMQAPCLFQSTFPSSPSSPSHFRSDGPQQQQQQLEKRETEDR
EKEDGRRKKEVGMYVGVEKALCLFERLFFPEGEEGGGGAAGRGGEGILYN
SDRRLRVVANATLAAFLAYEQEGGEWWKREKDNSGSPSLSSLLFKEAVGV
LLLPPPSACTATAVAAASTATAPPNPTSRSRFRSFRSSSFVASPTAATAA
AAATAAGTASSSAAVQDRTHAALLLLRTLLVDPLLGKDDDNSKTKEEEEE
GNKMVMALSPSPLLSPHAHLSLCSRVIDLLSSQPSFPSPFLLQAAWAVIP
SLAATGPGPLAFWQAHSARLVPLLLSATAGEGGGNRGRATAAAAFECLGG
MAVLLGPALFSRVEEEGGKEGG
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Synonyms
Publications