jgi.p|Nanoce1779_2|370508, gene_3689 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|370508
Unique Namegene_3689
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:968420..973802 +

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Properties
Property NameValue
TranscriptId370594
ProteinId370508
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:968420..973802 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03540NO08G03540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|370508mRNA_3689-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|370508mRNA_3689Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|370508

>mRNA_3689-protein ID=mRNA_3689-protein|Name=jgi.p|Nanoce1779_2|370508|organism=Nannochloropsis oceanica|type=polypeptide|length=1699bp
MKVHNEKKKHKANVHCLGGRVSEGGEGRSGPLENSEAGKSRAAFRKAMTT
FIHIYIPTHLTHKHTSKSTTTMVNPKDVPLGSSLDDIFGEIDETLGGEEG
TLTAGSSRSLVPTTSMGDASLTDMLKDVLEEKGNAEAKTAARPPPVTALP
STSGASASASTTDSGSLDELLKETGLGGEGCTDDNFDDIFGGVESDTADT
TTLTTKNGDAVNQPAQAGVSVLESSGAWKELDANERQDFLKWLEEDDFTQ
GLDALKLTAAVVSPISTIATETSSRPTSSSMPLPLPSTPPLSQPTTKTKE
TSTVGSTSSSSSSTSSTRIASPHRPSSPPFVVPSTPEEILSRIRSMLGRN
KEAAAMATAQATNSVAVTGNDKCSSSSPCTVNPLHLKLLCAEYPGGLPPS
LRPYLWFHLIPPHKLLSREFQYQQERGREERGEDRLHYRHQVPNSVVVRR
DAAAVARALLDEEGREYEGGKEERRNVLAADIERGLVFYCEKMRIDYEPE
MGAAYGALTLALLDVGGLREGTKEEAAAIVGRFHTLCGWLLPYLLLMPQA
REGYVREVHSEFRLLLTYHAPLLVQHLDRGRPGWELPPSLAVEASSSSFW
AKQEQIRQEAEAENIVGTLEGRWSGSNCISGSNKQQQQQQQQRRASDGNL
EVDRLKVMTRTKNLNNNSSSSSSSSSSSSSGGGMGTTDTSSAPAPAAARP
VSGSSSSSSSSSSSSTYSEGGIIPTSWLLGHCIGTALLSPPLSLSSSSSS
SLPKHNYHLDCLLSLMDGCLLRGDRFLGLFLTAALLLRHKTDLLSLQGPA
LRSRLDQLLLGVGTAGGGEGVAQLFLSSTYPSPPTSCSLQSLSSAITRWL
EEAERLDRITPISFRVHLTALEAFARQNTDGVLSPLPPSLPPSCLSAANE
DHQKQQQQQQQQQQQNSYAFQLIALTLPKQQEVDALLQESPLPHSQPLAS
TDLGTSTSTSTSTSVSTSTSTSTSTSTSAGTYKWALGTPERCRRQLQQAQ
GDPDTLALLTTKICLTVTPEEVAPALCLPSNSSSSSSSKGGSCSSLRFVA
LDCRPQEQVSMGGRFPTAYHLAPSRLEDPEEIIKLLVELEGFKGSMHLLL
VGTGLMMSGRIGSGGGGWERDGGKEGGITAAQRLREQVARAGREDLSHLH
NTALLLLKQGFPYVSILEGGFAATHTFLLHKTAEAAAAASAAAAGAPPSL
PSSSMSLGLSSLIDHVPSQCRMCKHEALLRFQQASVSSPSSLLPSSPSPA
PTKIHGPRFGRPASFGGKVGVGGVAGEPPSLAALTQLGQNSLGGFRTRAT
GLFGKLQAHAHAAQVQAQAHAQGGEEGGKEGGGLPQQLECVQEMAGTFLK
GTVSGLTKRAEQAMQEARGRAQAAQAAATAAAAGNWGRDAGGGIGSADGA
GGGLSASLSSGAIAAGAAGAAATVGGSGSMDGGRPASADGRVPSPPTTTA
APSSEAQASTAAAAVIAATTTTVHRDSPSLFVIEDDEDEDEDEDIRTRQQ
QEQQHATPSPIHPFSSSSPPSSTTRTKSGLDRDLALKQHVLNGVQKGQPI
DISPDSLPNAQLFPAYKLKRASPALSSSPSSISSPTIVAELPRFIVLTPE
RIIVLEEEGGRAGGRAGQGRVKSNHHLTEIARMTFLKKTPDVITLYFRMG
GMTEGEGGREKVVEGGSPKKENLKGRAYRVAEKEEFIGALQGRLQRFK*
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Synonyms
Publications