jgi.p|Nanoce1779_2|582884, gene_3646 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|582884
Unique Namegene_3646
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:851552..853343 -

Link to JBrowse

Properties
Property NameValue
TranscriptId582970
ProteinId582884
Product namePorphyromonas-type peptidyl-arginine deiminase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:851552..853343 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0047632agmatine deiminase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03160NO08G03160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582884mRNA_3646-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582884mRNA_3646Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|582884

>mRNA_3646-protein ID=mRNA_3646-protein|Name=jgi.p|Nanoce1779_2|582884|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MPGTQSAAAPAFIGFVAGSAAVMTLVAIYDLLDLGPTYRDRQRKKRNLCS
SGAGGGGSGSDSEGCRPIPSFLTAMYLYEREIGLGEALPSTPLNDGFHMP
AEWEHHAGCWILFPWQKDNWDHDAEPAQKAYAHVANAIQQHGNEQVTVGV
RSEDWSVARALLNPAVRVVELGCDDAWVRDSGPTFVVKDDQEKETREVRG
VDWNFNAYGGNYEPCERDQLVARKLLEVEGVRRYHAPVVMEGGSFHVDGE
GTCIVTEECLLHPSRNPGLSKEEIEEYLKTYLNVERVIWLEWGVFGDQDT
NGHVDNMCCFKGPGEVILHWTDDENDPQFERSWSAYITLTKEVDAKGRAL
RIHKMPSPGPLFYQEEDMDGLVVGERGGEVDKGGKKVVGARMAASYVNFY
LANEAVVVPQFLDPKDEEAIDFLQLLYPERRVVGVYSRDILLGGGNIHCI
TQQQPANVFDAF*
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Synonyms
Publications