jgi.p|Nanoce1779_2|525821, gene_3637 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|525821
Unique Namegene_3637
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:833541..835544 -

Link to JBrowse

Properties
Property NameValue
TranscriptId525907
ProteinId525821
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:833541..835544 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005875microtubule associated complex
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03070NO08G03070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525821mRNA_3637-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525821mRNA_3637Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|525821

>mRNA_3637-protein ID=mRNA_3637-protein|Name=jgi.p|Nanoce1779_2|525821|organism=Nannochloropsis oceanica|type=polypeptide|length=449bp
MYAQESRKRKLIHNKLLELQGNIRVLCRVRPMLAMEMAGGEGGGGKDVTE
YPSPEDLVITREDRGGKNKMAFEFDRVFAPGSTQGEVFEAVAPIVTSVLD
GYSACIFAYGQTGSGKTHTMDGPPEDRGVNFRALEEVFRLREERKGEMRY
TLSLSMLEVYNETIRDLLAGGGKGKGGGEGSKLDIRMGEDGGYEVQGLRL
VEVDSLEELWKLMESGKGNRAVGAHDMNEHSSRSHSIVSVRVRGESLQGD
RSLATVSKLHLIDLAGSERLSKTDATGDRLKEAQNINKSLSALGDVINAL
GSKNKAHVPFRNSKLTFLLQDSLGGNSKVLMFVNISPASYNVSETVCSLQ
FAGRCRAVALGVAKKGVVGSGPGGGEGGEGEVGRRKGEGEQLTVDLRSAR
GGEGGEELGGEGGREQRRVKTPPPPASVASGRVSPPPRRSSLGNASSR*
back to top
Synonyms
Publications