jgi.p|Nanoce1779_2|622811, gene_3470 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|622811
Unique Namegene_3470
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:424345..425770 -

Link to JBrowse

Properties
Property NameValue
TranscriptId622897
ProteinId622811
Product nameThiolase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:424345..425770 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622811mRNA_3470-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622811mRNA_3470Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|622811

>mRNA_3470-protein ID=mRNA_3470-protein|Name=jgi.p|Nanoce1779_2|622811|organism=Nannochloropsis oceanica|type=polypeptide|length=228bp
MHVHQLAALQAAYEGLEDAGIPLHEIFKTRTGVFVAGYCPFLPSVDAPDE
TFLRSSAMSSIADHVSYFLGTHGPSVTLETACSSSLVATALAANALSVGD
CDTAIVVGINYLSEKDFHLSLQACGVLVQGPACHPFDEDGPKGFFRAEGM
GCIVLRRMADAEQLGNRILVKLSRAVAASAGAADSSMDGAGRVYEQPCPN
GMRQMYGWDQGGETGGGGKRERMAFDI*
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Synonyms
Publications