jgi.p|Nanoce1779_2|582020, gene_3407 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|582020
Unique Namegene_3407
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:240925..241942 -

Link to JBrowse

Properties
Property NameValue
TranscriptId582106
ProteinId582020
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:240925..241942 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582020mRNA_3407-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582020mRNA_3407Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|582020

>mRNA_3407-protein ID=mRNA_3407-protein|Name=jgi.p|Nanoce1779_2|582020|organism=Nannochloropsis oceanica|type=polypeptide|length=302bp
MPSLVLLEILLRVRPHLLGRPRLQHSGNEPPATPKSLKGLQKHVVLKPRP
SSFPDTLLPYLWGWTSRHGDKGATERVQATPPSLVADGESSSCSSGGRDR
RGGTTTAPTPARSTPFLIATAQTLPILIAFILLRFLLPLWLLLPTALRLL
TTPASKGRPTSRDNHIFVLVVNVLFPKLVAATLTTTPTAAAAATAAAART
LPTVAVRVRGVVLRPPFVSSLPAIYGAARGKGDSGGSGRCSDGSTRGGGK
GAALVFLFLSLFIGRRQHVAGEVPSGQSAMREIVVVVVVMVVLVVGRGQR
R*
back to top
Synonyms
Publications