jgi.p|Nanoce1779_2|581917, gene_3372 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|581917
Unique Namegene_3372
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:158391..160734 -

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Properties
Property NameValue
TranscriptId582003
ProteinId581917
Product nameFAD-linked oxidoreductase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:158391..160734 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0018528iminodiacetate dehydrogenase activity
GO:0004657proline dehydrogenase activity
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006537glutamate biosynthetic process
GO:0006562proline catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00440NO08G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581917mRNA_3372-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581917mRNA_3372Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|581917

>mRNA_3372-protein ID=mRNA_3372-protein|Name=jgi.p|Nanoce1779_2|581917|organism=Nannochloropsis oceanica|type=polypeptide|length=354bp
MSVCVVEMGKLFKKFDTQDKGYITRQEFLEGYDRYFLPSSSPSSSSGAAA
PVAGDGKDGDLAAQLLARLDPNGTDRIDIIHWRIALALTDLSALTRLCRG
AGPLKAAVLSEEETELMQGLQLRLETLARRASSLGVRLMIDAEQSYFQPA
IDHLVLDLMQRHNKGKFVVYTTVQCYLKGAQRRIVREMQRAQRQDYFFAA
KLVRGAYMITERKRAEELGYPSPIQETIEDTHATYDGCVQLCLEAMARGE
NVELLIACHNQASIEKALVEMERLNLKGNTAGVYFGQLLGMADHLTLTLG
GAGYKAYKYVPYGLVGQVLPYLIRRAQENSDMLGGVGLEIELVGKELRRR
LLG*
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Synonyms
Publications