jgi.p|Nanoce1779_2|564316, gene_3367 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|564316
Unique Namegene_3367
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:140000..142019 +

Link to JBrowse

Properties
Property NameValue
TranscriptId564402
ProteinId564316
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:140000..142019 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008812choline dehydrogenase activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00400NO08G00400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564316mRNA_3367-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564316mRNA_3367Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|564316

>mRNA_3367-protein ID=mRNA_3367-protein|Name=jgi.p|Nanoce1779_2|564316|organism=Nannochloropsis oceanica|type=polypeptide|length=619bp
MKNSTMGGSAKADHTFYDYIVVGSGPGGATVARLLSDDPKNKVLLIEAGE
NRDNDPPITDSADAWIVPVDYVPEYFWQIAMLHNNFEYGTHEWPAYPSRR
VVEEFYAEEVEEGKRRQELEDAILNRRFGGGKTKGASRQRRALAEKVHRR
LHGYEGEMSMEQYMGGRLMGGSSSINGQQYVWPTKQLLESIQAEVGGDED
WSPENVYALLRELENYEGSSPQARGTEGPLNVKQAPANATASKAGNDFVA
SIINATGVSLLDDYNDPETPIGAFLQWQLTQNPDGSRASSSTSMLNAETR
ARKNLVIKTRATAMYVKFKKNVAQGIYYTHAGIGQTAYARKEVIIAAGHR
SSLLLENSGVGDARVIEPLLHRVGFEMVADVPGVGAYLGNDGVLMLKLNR
SDSTEHRDATPNDLYSGGAFLPWPNATTANHFPQTTQRFSQLLGTDQLGG
EEGLDFFHIGVILLNTSSNGFAHIQSADPLYAPLVTARTFNDKMDRANWW
YLLRFQVKPIIDQMMERGYTLISPEYSIFTDPTKNVNMKNLFEYLFQNYI
PAHHWFGTCKMGTDPKQGAVTDSGGRVYGVKRLRVADASIFPIKLDGNTG
VPAYIAGGVIAKKILAGK*
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Synonyms
Publications