jgi.p|Nanoce1779_2|553961, gene_3317 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|553961
Unique Namegene_3317
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:1194028..1196165 -

Link to JBrowse

Properties
Property NameValue
TranscriptId554047
ProteinId553961
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:1194028..1196165 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G05000NO05G05000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553961mRNA_3317-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553961mRNA_3317Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|553961

>mRNA_3317-protein ID=mRNA_3317-protein|Name=jgi.p|Nanoce1779_2|553961|organism=Nannochloropsis oceanica|type=polypeptide|length=576bp
MHPTAAPPPRALSPSTVPSSSACRARTGGIASTGMAFAFPNPSRVPLIST
SLRSSSPSSAASPCSPHDTTSFTYRLPDLVPLGGEDARTSQHIMVHIKPG
QSAQHRRFSMAPLAFSRSHSSSSDSSSPARVKPLHSEPQDEGSCVGTGSG
SNSREASSTLVPASSSPSSFPPPPSFSPSISSAERGATCVTETLSTTETD
NGNPSAADDADTTTLLSSSPSSSLPSFTITTSLAFLLLNIVTILWGSQHA
IIKIALLSSPDSPGAFNFLRFGLASLCFLPWTPSLFPSSSPASLSGVVPG
IEEEERQGLWKAGAELGVWMFLGFALQALGLQCTSASRSGFLLYLNVKLV
PLFAWLLLGRRPTLDVLGSALVAFVGTALLSFDGGSMPNVGDAWSLAAAA
ASAMFILRLEGAAKAYSLTRAKELNSATLWVTTLLCLGWMGGGGMEGGGG
MLELVQGLWKEDWKQIVYLGVVTSAVCNWIQTLGQREVPAEKAALIYALD
PVYGAAFARVLLGESEALGVRGYIGAGLVTAAAVFASLWARSGATGGGRE
QPEGVEMVKGGEEGRDGGERDAVRQ*
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Synonyms
Publications