jgi.p|Nanoce1779_2|629435, gene_3187 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629435
Unique Namegene_3187
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:877131..880134 +

Link to JBrowse

Properties
Property NameValue
TranscriptId629521
ProteinId629435
Product namemalate dehydrogenase, cytoplasmic
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:877131..880134 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030060L-malate dehydrogenase activity
GO:0003824catalytic activity
GO:0016615malate dehydrogenase activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0006108malate metabolic process
GO:0006096glycolytic process
GO:0044262cellular carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629435mRNA_3187-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629435mRNA_3187Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629435

>mRNA_3187-protein ID=mRNA_3187-protein|Name=jgi.p|Nanoce1779_2|629435|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MIGHEEHNSAPTATKRVLITGGAGQIAYALLPHLISGRVFGCQTRLIVHL
LDIPGTENALRGVQMEIEDAASPVVVGLVTTTDLRTAFTGVDYAILLGGF
PRLPGMERKELLAKNVEIITTHAAALDDHASRDVKVVVVANPANTLALVA
KKRASSLPAENFSCLTRLDHDRLRGMVAKKLTSLRISSSIPECSAAITAT
QVRNVAIWGNHSSTQVPSAGQAQVELGGKWVSIHEVLQEKDAAWLHGQLV
TSVQQRGAEILAARKLSSALSAASAISKHVRDWVHGTPEGEFVSMGVFVS
KDCTYDIPEDIFFSFPVKCKGGQWKVVEGLSLSEETRRRVLSTVTELVEE
RDLALSLVGGASHL*
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Synonyms
Publications