jgi.p|Nanoce1779_2|584840, gene_3177 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|584840
Unique Namegene_3177
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:856567..858920 +

Link to JBrowse

Properties
Property NameValue
TranscriptId584926
ProteinId584840
Product nameCarbon-nitrogen hydrolase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:856567..858920 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0047710bis(5'-adenosyl)-triphosphatase activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03700NO05G03700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584840mRNA_3177-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584840mRNA_3177Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|584840

>mRNA_3177-protein ID=mRNA_3177-protein|Name=jgi.p|Nanoce1779_2|584840|organism=Nannochloropsis oceanica|type=polypeptide|length=333bp
MRFASLASAAAATAASSSRLPMNPLVAVGQLTSTEDRDQNIRRCRDLAVR
AKKAGAALLCLPECFSLVGSSWRETVAAGQPIEGPMVSEMRTLAKEQGLW
LSLGGFPEKMPSPQNSKIEDSGDENERVYNTHIVLDDKGDIKALYRKIHL
FDVNFPNGPVLQESKYTAPGAEVVVIDSPIGRLGLSTCYDLRFPELYQAL
VKRGAEVLLVPSAFTVLTGQAHWEILLRARAIETQCYVLASAQAGQHNEK
RASYGHSLIVDPWGKVMEDAGGDASPALVMAEIDLKRLHEIRAKIPVQLH
RRRDVFFGVSGVGHSKGGGGEGGGGIGTAPSV*
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Synonyms
Publications