jgi.p|Nanoce1779_2|584816, gene_3171 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|584816
Unique Namegene_3171
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:845665..847292 +

Link to JBrowse

Properties
Property NameValue
TranscriptId584902
ProteinId584816
Product nameATPase, F1 complex, gamma subunit
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:845665..847292 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016469proton-transporting two-sector ATPase complex
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03630NO05G03630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584816mRNA_3171-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584816mRNA_3171Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|584816

>mRNA_3171-protein ID=mRNA_3171-protein|Name=jgi.p|Nanoce1779_2|584816|organism=Nannochloropsis oceanica|type=polypeptide|length=308bp
MSASLGLHAARRLALGGATRIALRGMASEKEIAARIKSTTGINKITKTMK
MVAASKMRGDEDRLKAGRPFQRWVDGFTPKPVLLEDFAKDIESLPQSNLL
VVVTTDRGLCGGVNSSLARVLKNMVPALDKAKKDVQMFIIGDKGRATMGR
PLGEFITQINSDSATPYNFSLAAALAQDVSQIKADAVHVVFNRFRSAIAY
EATVKTMYPPAALTGEPYVEYEFEPDTKTEVLDDMYEMAIATTLFTSMLE
SAAAEQSSRMNAMENASKNGEDLIKELSIQYNRARQSRITTELVEIISGA
SALEAAR*
back to top
Synonyms
Publications