jgi.p|Nanoce1779_2|553396, gene_2942 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|553396
Unique Name	gene_2942
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Alignment location	scaffold_7:308793..313855 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	553482
ProteinId	553396
Product name	Prolyl oligopeptidase family-domain containing protein
Portal id	Nanoce1779_2

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:308793..313855 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE164714	2022-03-15
GO annotation for N. oceanica CCMP1779 v2	2020-03-30
PRJNA285666	2019-07-03
PRJNA157867	2019-07-02
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008236	serine-type peptidase activity

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniL092	ncniL092	Nannochloropsis oceanica (N. oceanica CCMP1779)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO05G01540	NO05G01540	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|553396	mRNA_2942-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|553396	mRNA_2942	Nannochloropsis oceanica (N. oceanica CCMP1779)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of jgi.p|Nanoce1779_2|553396

>mRNA_2942-protein ID=mRNA_2942-protein|Name=jgi.p|Nanoce1779_2|553396|organism=Nannochloropsis oceanica|type=polypeptide|length=951bp
MLRRPRQVLLLLPREQWKTEQKKSLCSHVACRTSTYTQPSRPRFLASGLV
HTKAPSSSSLANAPPRPPRGPDTDAYKWMEEPGSTQMLAHLDAENRYSYK
AMQSTHGLQATLFREIYTYFRPTSEEIEAESGKETTSHLAEAGGDGYMYY
SRRPRGCNYPIYYRRPQQSAAVAAVDSGAEDASDTSSSTSEYKEEAETIL
LNQNAMPDFYQRQHLVDLKVSPPSDRGMEGRSSLVAFTLAAPEAMEQGTT
LYIRIFDNNSSSSSSSTASPSSSWWTADRGIWEGIGSFEWGHLSSADKFK
IRGTGTSTSTSTNISTSTSNTNFSSLPKRNDEDTNEISKSTPTRVLYYTK
VNHHGRPHQLWMVRLELNGKGLHDAPRLLYSIPEEDEASFLSLGTTKDKK
FVTCSANSKTTSEVQLLPGPGSKEERRKGGREKECEPLLFRKKKAGIQYF
VDHGGGLFWVVTNEKEKQIRDNINSSTGSIDDMDLFHDHCVLYERLHGTP
SLRVIARRPSSSSFSSSSSSSSSSSSSSQPPTTSSPFHRPILPREVETGR
LQPGLNQDYFADAVRFSLTSPILPDVTYEYNMKERQLIELHRETLRARPP
IKQHQQRDYECQRHWVQSRHGEVQIPLTLAYKCGLPCPAPVLLIAYGAYG
VSLDLSFRPEILPLLDRCWVIAYAHVRGGGELGRRWHAQGKGAKKINSIQ
DYLSCVEWLLERGWTRPGLLVGQGASAGALVVAGGIHRCPEVFGGMVLKV
PFLDLARTMTDPSLALTVHEYDEWTEGRDPRRDRDMEARLRELSPYDTLD
LLLPSTAAGEREGGKGGGGGKKALPPSLLIASLADRRVHYWEAAKYAAKA
REISEGERTGEVLLRMEGDRAHESPMALTDVCQEAAFEAAFMITRLGLEE
KGKEGDRGGGVGGGGGGRTTAGGVAPGWEGCATASGQSPAAGVLVKQSTL
*

Synonyms

Publications