jgi.p|Nanoce1779_2|553321, gene_2900 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|553321
Unique Namegene_2900
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:202035..203366 -

Link to JBrowse

Properties
Property NameValue
TranscriptId553407
ProteinId553321
Product nameserologically defined breast cancer antigen NY-BR-84
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:202035..203366 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01090NO05G01090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553321mRNA_2900-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553321mRNA_2900Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|553321

>mRNA_2900-protein ID=mRNA_2900-protein|Name=jgi.p|Nanoce1779_2|553321|organism=Nannochloropsis oceanica|type=polypeptide|length=411bp
MISPNISPKELTLYERLRRLDFHPKTKDDFKVRTAYGGATSVVALACMVC
LFLTELKYSMDKEIVDHMYVNSSRDTRLLFNFNMTFPSVSCQLLSADAMD
PLGNKQEGVESHVFKTRLDAAGNPLSAKTWHKLGDTFTDVDVLAKHEEDS
KAQFVQGEEEMEQWVECGNCYGAGEEGECCNTCYSVKEAYDRRGWAFMGL
NVEQCQQENLKNPLGEEGADEGCNIHGSLLLTQESGNVHFAPGEQLRHSG
ALNVADLVMFTFLKFNISHEIHHLSLGEEFPGFKSPLSNQVRSVADGYGM
YQYYLKVVPTVYKHLNKASTVSNQYAVSEHIRHINPGSNRGLPGVWFFYD
TSPVHVEFEERRRGLLPFLTSVCAIVGGVFSVFGVVDGVVHNLIQRGVGG
GMKKGGAPGS*
back to top
Synonyms
Publications