jgi.p|Nanoce1779_2|333686, gene_2609 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|333686
Unique Namegene_2609
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:760883..763266 -

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Properties
Property NameValue
TranscriptId333772
ProteinId333686
Product nameorotidine-5-monophosphate decarboxylase and orotate phosphoribosyl transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:760883..763266 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004588orotate phosphoribosyltransferase activity
GO:0004590orotidine-5'-phosphate decarboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006221pyrimidine nucleotide biosynthetic process
GO:0006207'de novo' pyrimidine nucleobase biosynthetic process
GO:0009116nucleoside metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL072ncniL072Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02770NO07G02770Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|333686mRNA_2609-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|333686mRNA_2609Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|333686

>mRNA_2609-protein ID=mRNA_2609-protein|Name=jgi.p|Nanoce1779_2|333686|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MDHEAEISGQICQIVHRELYAQVDELQHHCWTDDDPMSFFESLEARVRAV
DSLLCVGLDPHTAQLPEATGAAAYTFCKRIIEATLPQAAAYKPNIAFFEA
LGKEGWQALLNVMKLIPAEVPVLLDAKRGDISTTAEAYATACLEGVGATG
VTLHGYMGVDSVAPFMKDPRAGAFVLCKTSNPSSADFQTIPCSSPQQPWL
LYEEVARRAGEWGSKYQERIGLVVGATDTEALQRVRAIVPNMWILAPGIG
AQGGDLEAACSAGLSAEGSKLLLPISRGISKTTDPGEAAEAFRVAINAAR
KGPILAAAAAASVSRNRSGLSSLKPYQSDFIRFALEREVLLLGSFTLKSG
RVSPYFFNAGKFTSGLALKRLSHFYVQSLLENKLEFDVLFGPAYKGITLA
SAVAVALAETTGRDVPFAYDRKEAKDHGEGGRLVGADMRGKRVVIVDDVI
TAGTAIRESMELLASVKAKVVGVVLALDRQERGVESPLSAVQSVEQQFGL
TVLSVVGLDALLAFFLEEGEKGEGERGREGWEAIREYRIRYGVTLPQA*
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Synonyms
Publications