jgi.p|Nanoce1779_2|576721, gene_256 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|576721
Unique Namegene_256
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:636971..639024 -

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Properties
Property NameValue
TranscriptId576807
ProteinId576721
Product nameCTLH/CRA C-terminal to LisH motif domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:636971..639024 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046404ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0051730GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
GO:0051731polynucleotide 5'-hydroxyl-kinase activity
GO:0051732polyribonucleotide kinase activity
GO:0051733polydeoxyribonucleotide kinase activity
GO:0051734ATP-dependent polynucleotide kinase activity
GO:0051735GTP-dependent polynucleotide kinase activity
GO:0051736ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
GO:0051737GTP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02650NO01G02650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576721mRNA_256-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576721mRNA_256Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|576721

>mRNA_256-protein ID=mRNA_256-protein|Name=jgi.p|Nanoce1779_2|576721|organism=Nannochloropsis oceanica|type=polypeptide|length=451bp
MFHLEYTLVRISCEALSSHFQRVRKQVMRELGQIVTLLKKQDNPDSTTDA
LRVRLLHLREALVAADAQEKDLFERCQRKLQTLATAQKDEEASPSLSIVP
PQYPSRHGLTLRRKLQLERLVGEYLLRQGYLESLSLLEKEGASTQGAGAG
GVGKLFDLDIFIKCRAVERQLVEKRDCMGALAWCADHASKLRRLNCPLEF
QLHKQQFLELVRKGHRIQALEYASEHLDPTANSAAAAVGGAGGATNTPGL
SIEQLWEVQQAMATLALADPEACTVPEYQRLFAVERLRELGDSFAAAARR
CYGMTQDYSTLEVCLQAGLTALKTPLCRVGAPGEIMAKAKEEDDGQEIGM
VAEDEGHYNQDCPVCSPTGRALAVGLPLAHFGNSYLTCRCTGEAMDGGNP
PMVLPNGRVYSQRAISENLLSVDGSGAVWVTCPRTGDSFAPSDVKNIFVI
*
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Synonyms
Publications