jgi.p|Nanoce1779_2|668855, gene_2168 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|668855
Unique Namegene_2168
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:946954..954557 -

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Properties
Property NameValue
TranscriptId668941
ProteinId668855
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:946954..954557 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03840NO04G03840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668855mRNA_2168-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668855mRNA_2168Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|668855

>mRNA_2168-protein ID=mRNA_2168-protein|Name=jgi.p|Nanoce1779_2|668855|organism=Nannochloropsis oceanica|type=polypeptide|length=2339bp
MPAKGWLFSPPLALKLVQPSVKGGIKSSRGKFGAAAGRRKLHLLVVALLL
GLCAHVIHADDPVVTVLVPGEVVEGALASKVHWSGQARKVWGLEGRKSSL
ACKTYRYFEIASTGHTSQDLIVTATPLGGDVDLYMSVKNDLPFPDHERFE
WSSTHLGTDSLVIAEEDPKNCRHQQQQQQKQQGGGCTYRVGVYGYIGGGF
TLLARWNSSEPVPLALGRPQSDSVTTGTSRQYSFNLSPGALSGGGRDAST
GATPVVDLEVLLQPLDGDPDVYVTLDGKRPTTEHYQYRSTDFGSTADRIV
MGPHDSFFQRYCPGGRCLVRVAVVGFHDASYSLMLSALSAPIRLQLDRPV
ATTLRPALAQRFTLPWPEGGATGVVGSLRITISPQSGPIPRVYASCRTAW
PNVTVNDWKWEENSAHPSPTLVIDTAMGEGKGCGVGENLTLAVVADSLAL
VSVFVSTDAVGTMPRLLPGVQTPGEARKNDVSYFGVRMGKDEYADIELIL
TVTSGEADMYVSDSYVRRPVVDAANGVVTSYTLSSAHDGDDRLTIQHSMF
SQCGQGQGGESKEACYFVVGVVGRKWASSEFRLLAKTRDATVTLHDGMAV
RDQVAGKSYAYYKILVVNPQLDLTLTITPLSGDPDLYVGAPPLTRPSREN
HTWASRSFGADSLTVQAVGLKKHCEPDPTIGLGCAIYIGVYAWTDASYSI
LASLNMGWLNPSILVHGLPQSGEVAKGAYHYYQLRIPPVAADAVQPVIRL
TLLPEDESDQDLYITFSRDKEPGKDSYDVRSASWSDNDEVVLVPGAEHYC
TDCTLYVAVYGYEGGPYSLVATLTSTQQQLQLGVPVRGTVAASSSVFYFV
DWHSENDDGSSISTNSSSSDLIITLTPEAGRPRVYASCSHAYPNATAHGW
MLDSREDQNLHVNSSSAAPGAAGIGEREGPCRRPGKLWLAVASNGNGGGG
GGAASYSLMVAIDNSSKSVPLLVPGTPTAGSVAFHRFQYYQVRMGAAGFV
DMEAVLSVTRGEADVYVSQSFESRPVYDTGKKKVLNWTARSEKRGSDHVS
LPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALR
DEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNH
TWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSIL
ASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQN
LAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSM
TWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVET
GVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLYVL
AAKYEDEDEGEDEEGGGGEAAVLAEQGPLSLEEQSVTVDAFTNTSYVLTA
SVEAMSVVPLAGGRPQTSHVDQDGMKYFSAVLGSSTEDMRVSLTMFSGSA
ELYVADRVDMAHLPLPGDRTSWKYTSKNNWQGRNQVVIPGPHANRTQFAI
GVRGLEDASAFSVLASFSQSPVFLQEGVPVQQSLSPGRMAWFVYRIAKAE
DVRVAVTALSGDPDVLASTTHSRPACVRSQEGTDEEGVASFACGNYTWIA
QTYQNDELVILHDLPCAEVGNTNVNASACSPRMLAPGQLLYIGVFAYDDK
EDTTFTLSLTTGGGHTNLLPGHPQHGNTRLGVICQTRRADGTCGTSSVSK
AEVAYYRFLVPPPSALFGEDEAAHVSVILEPVCNATTFTWKGMEARCAIG
CACDPLELYIWSCAESECDPEDEYPHPGHYQMKQTAAQSYSTVFLAHDKY
NPNNGFCNPKTAGQSCLYFISVYHAEVEDGRQGGSFTITASTNKDVTILP
TRRNPASPDGLVSSSLDTVDASAGEVKGSKRYQMYTTKGGDVQLTLEACA
GEMSLAVCDGSCRALYPTQGDYRFFADTTQICTREGCRPIPGGRGLPRIA
LDHVMEDSFFLTVNGTGKYMLKVATTTEGHAIAPVLAPPSSGSSAPLVKH
IDYNRVTLSWPAATLKVPGKKRGRGEGEGVVPQGVKYKVFAFPEPILWDD
NGREGGVERNPAEKPVLHTVCGVEHYAAVSQAGGEGEEGNERGGGMKTYV
GEVPAGATSHTVTDLVPGTEYRFVVLASCDAVCLRASSLMPEGNFLPCGG
PEPCQNQHCLYAMTRATAGGGGWIGGGEGKLRVSALLVVLAVLTMVGLMA
QMAKRRTAGAEVGRREGGREGGGGLMVRRPQQVDYEMTISPTGTASVTRG
ANALASPREMREGGRGGERYERLLIREGEEEEGRQQLM*
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Synonyms
Publications