jgi.p|Nanoce1779_2|579222, gene_2136 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|579222
Unique Namegene_2136
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:882040..883779 +

Link to JBrowse

Properties
Property NameValue
TranscriptId579308
ProteinId579222
Product nameOTU-like cysteine protease
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:882040..883779 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016289CoA hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03570NO04G03570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579222mRNA_2136-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579222mRNA_2136Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|579222

>mRNA_2136-protein ID=mRNA_2136-protein|Name=jgi.p|Nanoce1779_2|579222|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MPLTLKINGPEGKSVVLKGLDDGLTLQQLKDKVQETFGVPGVEQKLRASF
PPKDVVMQDETALVTALGIQSGSAITVVREAANESASVAAAAVTITSAVR
QLMDMGFPAAVAAKALEMAHNDVGGALELCIGGVVTEESLGSAPAPPPSV
PVSTHGGMSTANRVMIRRVVDADNSCLFNAIGYCMEKDRKLGTKLRRIIA
DCVRNRPDVYTEATLGKTPKEYSDWIQDPTQWGGEIELFVLSQYYGCEIV
AVEIKSVHAYVYGEGKNYSRRIYVLYDGVHYDALAMAAGSPTAPESLDMT
QFPAGDEGTKDAALAVAAQLKQERQFVDMAGFTLRCLTCMKGLSGQEEAK
AHAAATRHQNFGEY*
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Synonyms
Publications