jgi.p|Nanoce1779_2|579071, gene_2099 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|579071
Unique Namegene_2099
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:811439..813566 +

Link to JBrowse

Properties
Property NameValue
TranscriptId579157
ProteinId579071
Product nameHIGH-chlorophyll-fluorescence 101
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:811439..813566 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03240NO04G03240Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579071mRNA_2099-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579071mRNA_2099Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|579071

>mRNA_2099-protein ID=mRNA_2099-protein|Name=jgi.p|Nanoce1779_2|579071|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MKAALRKKDFVPTIIIIVLALLLGAVLQCRAFTPPQQAPMSSTRRPQVSS
FLPPSRRGPSASRSSVLTHTPLPYATLSAEQSPVDSVSSSAVASSNDENL
TQVITQLREVMDPDLGSDVVTLGFIKNLTVAGETGSVRFVLELTTPACPV
KDDLKAQAIRVVEKLPWVSKAEVILSSRPIDADRPASANIKATGLSLVNN
VIAVSSCKGGVGKSTTAVNLAFALDRQGARVGILDADIYGPSLPTMVIPD
TEVVEFVESQIRPMVKLTGVDAAGQPKGVKLMSFGYVNPGAAAIMRGPMV
IQLINQLLTLTSWGELDYLILDMPPGTGDIPLTLCQSLNITAAVIVTTPQ
RLSFTDVVKGVDMFDTVNVPCVAVVENMAYADASALDDAASRGASDPQGS
ASTVGSKPWKRLRQEIEEVIKAAEDTKTQAGLVDELLATVLRRLQADRVA
RPLFGRGHRQRLADMWGLTNTVSLPVLEEVSRSGDSGVPLVLGQPNSAPA
QVFMDLAGRVVREVAKLRHDRSRLRPSITYLPEEHMIAVKMHGYSDTGGA
EAVAPPQKMSPAALRRQCRCAMCVEEMTGRQILRPEDVPEEIKPVEIGAV
GNYAVGITWTDGHKSLFPYRSFVDGYDKDMKPAKESR*
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Synonyms
Publications